If you are using wing nuts on your starting battery switch them to stainless nuts. Tighten them with a wrench. Wing nuts have a bad tendency to loosen or not have the best connectivity. Also check your wiring for your charging system. Make sure you have no corrosion and make sure all connections are tight and clean. Also check your grounds on the engine...a loose or corroded ground will cause a low charge situation. Many outboards do not charge at a very high amperage...and like IBNFSHN said, short runs you'll eventually run her down. Most cars charge between 60-100 amps...most outboards...smaller ones and older ones will charge 10 amps or less....add that to short runs and you aren't putting back what you take out...then you add the aerator and electronics and a full day...you'll see that. Most newer ones will charge at a higher rate and even have car style alternators.
I like an onboard charger myself...I have a three bank and hook it up normally when I get back from a trip and before I go. Never have an issue. Just some things to think about.
Like IBNFSHN said...something isn't right...put the thing on muffs....put a multimeter on the battery and see what you are getting to it...should be above 12V...if not could be rectifier...(volatage regulator)....stator...alternator (if equiped)...you should not run down that fast.
"But if serving the Lord seems undesirable to you, then choose for yourselves this day whom you will serve, whether the gods your ancestors served beyond the Euphrates, or the gods of the Amorites, in whose land you are living. But as for me and my household, we will serve the Lord.” Joshua 25:15